Issues

A few bugs to squash to get dinf running on Python 3.13/3.14
RacimoLab/dinf#408 · opened on Jun 30, 2026
5
Test on Python 3.11
RacimoLab/dinf#334 · opened on Apr 26, 2023
Use orbax for saving trained models
RacimoLab/dinf#320 · opened on Mar 30, 2023
switch from flake8 to ruff
RacimoLab/dinf#319 · opened on Mar 30, 2023
flakey test on macos /w python 3.9
RacimoLab/dinf#310 · opened on Mar 15, 2023
update docs guide/accuracy.md page
RacimoLab/dinf#308 · opened on Mar 15, 2023
get_genotype_matrix(..., require_phased=True) bails on missing data
RacimoLab/dinf#220 · opened on Sep 14, 2022
try methods suited to optimisation of a noisy function
RacimoLab/dinf#171 · opened on Jul 14, 2022
2
save network params for every epoch when serialising
RacimoLab/dinf#169 · opened on Jul 13, 2022
BagOfVcf: can't filter contigs without providing lengths
RacimoLab/dinf#164 · opened on Jul 10, 2022
add option to force-ovewrite of existing output files
RacimoLab/dinf#149 · opened on Jun 29, 2022
test the example models
RacimoLab/dinf#144 · opened on Jun 24, 2022
Provide an example of sampling recombination from a genetic map
RacimoLab/dinf#85 · opened on Mar 3, 2022
MultipleBinnedHaplotypeMatrices: support per-population phased.
RacimoLab/dinf#34 · opened on Dec 15, 2021
MultipleBinnedHaplotypeMatrices: support per-population max_missing_genotypes.
RacimoLab/dinf#33 · opened on Dec 15, 2021
add optional demography_func DinfModel field
RacimoLab/dinf#21 · opened on Nov 30, 2021
consider caching genotype data from vcfs
RacimoLab/dinf#11 · opened on Nov 24, 2021
support online training
RacimoLab/dinf#7 · opened on Nov 24, 2021