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@AllenInstitute

Allen Institute

Please visit http://alleninstitute.github.io/ for more information.

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  1. AllenSDK AllenSDK Public

    code for reading and processing Allen Institute for Brain Science data

    Jupyter Notebook 400 165

  2. dipde dipde Public

    Numerical solver for coupled population density equations

    Python 27 16

Repositories

Showing 10 of 525 repositories
  • npc_lims Public

    Tools to fetch and update paths, metadata and state for Mindscope Neuropixels sessions, in the cloud.

    AllenInstitute/npc_lims's past year of commit activity
    Python 0 MIT 1 5 2 Updated Oct 29, 2026
  • MultiTaskMPN Public
    AllenInstitute/MultiTaskMPN's past year of commit activity
    Python 2 2 0 0 Updated Oct 29, 2026
  • arborist Public

    Trees are the most inspiring structures

    AllenInstitute/arborist's past year of commit activity
    Python 2 MIT 0 0 3 Updated Oct 29, 2026
  • npc_sessions Public

    Tools for accessing and packaging data from behavior and epyhys sessions from the Mindscope Neuropixels team, in the cloud.

    AllenInstitute/npc_sessions's past year of commit activity
    Python 2 1 69 (3 issues need help) 1 Updated Oct 29, 2026
  • scCairns Public

    Iterative integration/embedding and inspection/filtering with logged manifest of decisions.

    AllenInstitute/scCairns's past year of commit activity
    Python 0 1 0 0 Updated Oct 28, 2026
  • MIES Public

    Multichannel Igor Electrophysiology Suite

    AllenInstitute/MIES's past year of commit activity
    IGOR Pro 30 11 289 6 Updated Oct 28, 2026
  • dynamic_routing_analysis Public

    Tools for accessing, processing and presenting data from Dynamic Routing experiments.

    AllenInstitute/dynamic_routing_analysis's past year of commit activity
    Jupyter Notebook 3 0 1 0 Updated Oct 28, 2026
  • neuroanalysis Public

    Modular analysis tools for neurophysiology data

    AllenInstitute/neuroanalysis's past year of commit activity
    Python 9 MIT 11 1 3 Updated Oct 28, 2026
  • abc_atlas_access Public

    Documentation and examples demonstrating how to access data from the Allen Brain Cell Atlas

    AllenInstitute/abc_atlas_access's past year of commit activity
    Jupyter Notebook 128 41 21 7 Updated Oct 28, 2026
  • neuroglancer Public Forked from google/neuroglancer

    WebGL-based viewer for volumetric data

    AllenInstitute/neuroglancer's past year of commit activity
    TypeScript 0 Apache-2.0 426 0 1 Updated Oct 28, 2026
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