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Something critical changed from 1.14.14 to 1.14.15 #501
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Hi.
I have just installed Ubuntu on a new single blade and I was not able to run my optimization scripts with 1.14.16.
I downgraded to 1.14.14 and everything is fine again.
I have a class that defines a custom morphology overwriting the one contained in BPO and I think is out of date with 1.14.15/16.
class GrCMorphology2020(ephys.morphologies.NrnFileMorphology):
def __init__(self, morphology_path, do_replace_axon):
super(GrCMorphology2020, self).__init__(morphology_path, do_replace_axon)
Which are the changes I have to do to be on par?
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AurelienJaquier commentedon Oct 28, 2024
Hi @SteMasoli ! Sorry for the late response, I had a few weeks off and was away.
1.14.15 introduced new optional arguments to the
replace_axon()method:axon_stub_lengthandaxon_nseg_frequency. See here for method definition.So if you are re-defining this method, be sure to also have these arguments, even if you are not using them.
If you are calling
replace_axon()(e.g. ininstanciate()), verify that the arguments are compatible.