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Add staged inter-distance propagation with variable separation - #247

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zayenz wants to merge 12 commits into

feature/min-distancefrom

feature/inter-distance

Commits on Oct 9, 2026
- Add quadratic inter-distance bounds propagation
  zayenz
  committed
  9d3037a
- Stage inter-distance propagation and support variable separation
  zayenz
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  c9c12af
- Document inter-distance algorithm sources and invariants
  zayenz
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  eb27259
- Credit inter-distance coauthors and cite only the papers
  zayenz
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  3a3873a
- Export inter-distance propagators and split struct declarations
  zayenz
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  6658ca8
- Fix inter-distance allocation and DLL exports on Windows
  zayenz
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  3acea3e
- Use region-backed residues and clarify inter-distance sweeps
  zayenz
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  4038357
- Name the inter-distance residue range merge
  zayenz
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  57907b7
- Make inter-distance filtering prerequisites explicit
  zayenz
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  21b2418
- Track inter-distance sources in Autoconf dependencies
  zayenz
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  e2e6e7b
- Express inter-distance task ordering with tuple comparisons
  zayenz
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  6a488c0
- Keep inter-distance tests focused on harness checks and regressions
  zayenz
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  b83ab14