Restructure docs: replace tools-reference.md with ql-mcp/ primitives docs and add testing strategy#33

data-douser merged 3 commits intomainadvanced-security/codeql-development-mcp-server:mainfrom

copilot/improve-docs-for-codeql-serveradvanced-security/codeql-development-mcp-server:copilot/improve-docs-for-codeql-serverCopy head branch name to clipboard