Issues

• Schema term tracker

  schema-term
  ga4gh/refget#110 · Filter by author nsheff opened on Oct 15, 2025

• Refget Sequences start/end query parameter and range request corner cases

  refget-sequence
  ga4gh/refget#107 · Filter by author jmarshall opened on Sep 21, 2025
  4

  

• Refget Sequences returning subsequences and choice of 200 vs 206 status code

  refget-sequence
  ga4gh/refget#106 · Filter by author jmarshall opened on Sep 21, 2025
  3

  

• Dealing with pangenome multi-level names

  refget-pangenomes
  ga4gh/refget#104 · Filter by author nsheff opened on Sep 17, 2025

• Graph representations and refget pangenomes

  refget-pangenomes
  ga4gh/refget#103 · Filter by author nsheff opened on Sep 17, 2025
  1

• refget: v2 spec for Range header errors does not align with typical usage

  invalidrefget-sequence
  Task

  ga4gh/refget#89 · Filter by author andrewyatz opened on Feb 7, 2025

• More powerful list endpoint for additional search function

  refget-seqcol
  ga4gh/refget#88 · Filter by author nsheff opened on Jan 22, 2025 · v1.1
  2

• New schema term: accessions

  refget-seqcolschema-term
  ga4gh/refget#79 · Filter by author nsheff opened on Jun 12, 2024

• Test suite?

  refget-seqcol
  ga4gh/refget#74 · Filter by author rob-p opened on Mar 29, 2024
  15

• Should we prefix the digests that we return from seqcol?

  refget-seqcol
  ga4gh/refget#53 · Filter by author nsheff opened on Jul 26, 2023
  9

• Alphabet as inherent property of a sequence collection

  refget-seqcolschema-term
  ga4gh/refget#46 · Filter by author ahwagner opened on Apr 21, 2023
  2

• Identifier construction: To prefix or not to prefix

  refget-seqcol
  ga4gh/refget#37 · Filter by author nsheff opened on Oct 5, 2022 · v1.0
  11

• Fingerprinting sequences using gaps

  refget-seqcolschema-term
  ga4gh/refget#29 · Filter by author andrewyatz opened on Mar 9, 2022
  3

• Would molecule designation also know about how many strands there are?

  refget-seqcolschema-term
  ga4gh/refget#16 · Filter by author andrewyatz opened on Jun 30, 2021
  5

• Reverse complement of a sequence and possible supporting reverse complemented coordinates

  refget-sequence
  ga4gh/refget#15 · Filter by author andrewyatz opened on Jun 30, 2021
  6

• Consumption of seqcol into existing file formats

  external-integrationrefget-seqcol
  ga4gh/refget#13 · Filter by author andrewyatz opened on Jun 30, 2021
  6